Data Collection

workflow_name (# downloads, # views, scipion version)
CTFDiscrepancy (35, 281, 1.3): Compare CTF estimation given by two diferent packages.
2D_class_streaming_GL2D_assignation (24, 72, v2.0 (2019-04-23) Diocletian): This piece of workflow makes an initial classification of 10k particles using relion2D and cryosparc2, making 32 classes each one. Afterwards, xmipp-GL2D is assigning the new incoming particles on-the-fly to one of the 64 initial classes. At the end, a...
streaming_to_2Dclassification_noDoseWeithed (23, 70, 2): This complete workflow is designed to work in streaming from movies to 2D classification in an assisted way. The recommended usage is importing it in an empty project, setting the protocol parameters according to your data and launching them one by one...
SemiAutomaticPicking_Xmipp_Cryolo (16, 47, scipion2 scipion3): Semi automatic picking module using Xmipp and Cryolo, and making an AND consensus. By default, the input micrographs are preprocessed in order to remove hot pixels and to downsample them to simplify the 2D analysis. Also, by default, the particle...
ARM_gain_test1 (15, 38, v2.0 (2019-04-08) Diocletian (release-2.0.0 37dd28f)): Adapted SerialEM-based workflow with NON corrected GAIN from K3