Data Collection

workflow_name (# downloads, # views, scipion version)
Phase_plate in ScipionBox (120, 820, v1.2.1 (2018-10-01) Claudio): Phase_plate in ScipionBox
2D_class_streaming_GL2D_assignation (117, 839, v2.0 (2019-04-23) Diocletian): This piece of workflow makes an initial classification of 10k particles using relion2D and cryosparc2, making 32 classes each one. Afterwards, xmipp-GL2D is assigning the new incoming particles on-the-fly to one of the 64 initial classes. At the end, a...
CTFDiscrepancy (103, 833, 1.3): Compare CTF estimation given by two diferent packages.
streaming_to_2Dclassification_noDoseWeithed (96, 627, 2): This complete workflow is designed to work in streaming from movies to 2D classification in an assisted way. The recommended usage is importing it in an empty project, setting the protocol parameters according to your data and launching them one by one...
ARM_gain_test1 (90, 595, v2.0 (2019-04-08) Diocletian (release-2.0.0 37dd28f)): Adapted SerialEM-based workflow with NON corrected GAIN from K3
Reprocessing of EMPIAR-10389 data (urease) with Scipion (68, 644, 1): Scipion workflow from: Using Relion software within Scipion framework Grigory Sharov, Dustin R. Morado, Marta Carroni, José Miguel de la Rosa-Trevín bioRxiv 2020.12.06.399808; doi: https://doi.org/10.1101/2020.12.06.399808
ARM2_WoGAIN (31, 210, 3.0.0): Acquire with Xmipp Gain
P08 Facilities (31, 203, 3.0.0): From movies to 2D particles and classes
BASIC_ARM300_WF_SPA (8, 65, 3.0.0): Basic workflow to import and correct movies with gain
SPA&QM_SmartEPU (5, 39, 3.0.0): To import Movies and aligned movies