Courses
workflow_name (# downloads, # views, scipion version)
Relion_3_tutorial-betagal
(289, 1542, v1.2.1 (2018-09-11) Claudio):
Relion 3 tutorial in Scipion. Reaching 2.9 reported by monores.
T20s_proteosome_tutorial
(141, 832, v1.2):
Tutorial workflow used for some Scipion courses.
All2Monitor_CPU_Gain_XmippAlign_MaxShift_CTFfind4_XmippCtf_CTFcons
(91, 628, v2.0 (2019-04-23) Diocletian):
A basic workflow from movies to CTF consensus using only CPU
ModelBuilding
(89, 443, v2.0 (2019-04-23) Diocletian):
model_instruct2019
From movies to particles
(88, 408, 1.0):
Workflow that uses some of the most advanced algorithms currently present in Scipion. Consensus is a
All2Monitor_GPU_Import_Gain_Mcor2_MaxShift_gCTF_XmippCTF_CTFcons_Summary
(81, 587, v2.0 (2019-04-23) Diocletian):
Workflow to monitor gain stability, movie alignment and ctf estimation using the summary monitor. GPU
Relion tutorial (part 2)
(80, 523, v2.0 (2019-04-23) Diocletian):
Part of the workflow for Relion tutorial
fullProcessing_ScipionCombined_fromMoviesTo3Dbionotes
(76, 563, v2.0 (2019-04-23) Diocletian):
Full processing workflow from movies to 3D bionotes.
Day 1 alignment and reconstruction
(11, 74, 3.0.0):
Workflow shown and practiced during 2021 tomography course on Day 1
Tilt series alignment and tomogram reconstruction
Day 2 picking pyseg and membrane segmentation
(10, 73, 3.0.0):
Workflow shown and practiced during 2021 tomography course on Day 2 Tomogram picking with eman and dynamo