Workflows
workflow_name (# downloads, # views, scipion version)
Atom_Struct_Modeling_Demo
(467, 1149, v2.0 (2019-03-06) Diocletian (release-2.0.0 99cd4821da)):
Test project used in model building tutorial: https://github.com/I2PC/scipion/wiki/tutorials/tutorial_model_building_basic.pdf
import_fitChimera_coot_refmac
(351, 774, 1.3):
Basic model building; (1) import data, (2) rigid fit with chimera, (3) manual refinement coot and (4) automatic refinement refmac
Phase_Plate_mottioncor_ctffing_gctf_gain
(349, 777, 1.2):
Basic workflow for phase plate collection with motioncor2 ctffind gain and sumamry
BASIC_Import_Mcorr2_Ctffind4_Summar
(348, 803, 1.2):
Basic workflow for facilities: motioncor, ctffind, summary
demo_until_particlePrunning
(334, 514, 2.0.0):
Dynamic template to launch a form asking for: Deposition path, pattern, voltage, spherical aberration and sampling rate.
NOTE: incluede this file to $SCIPION_HOME/pyworkflow/templates in .json.template format in order to be able to be open it by: sc...
fullProcessing_ScipionCombined_fromMoviesTo3Dbionotes
(331, 660, v2.0 (2019-04-23) Diocletian):
Full processing workflow from movies to 3D bionotes.
DnaB ADP (test 1)
(315, 522, v1.2.1 (2018-10-01) Claudio):
import micrographs, preprocess, ctf, image, picking
Relion_3_tutorial-betagal
(304, 1691, v1.2.1 (2018-09-11) Claudio):
Relion 3 tutorial in Scipion. Reaching 2.9 reported by monores.
T20s_proteosome_tutorial
(151, 948, v1.2):
Tutorial workflow used for some Scipion courses.
BASIC_Import_Mcorr2_Ctffind4_Gain_Summary
(132, 812, 1.2):
Basic workflow for data acquisition with import movies, motioncor2, ctffind, gain and summary