Workflows
workflow_name (# downloads, # views, scipion version)
Relion_3_tutorial-betagal
(110, 385, v1.2.1 (2018-09-11) Claudio):
Relion 3 tutorial in Scipion. Reaching 2.9 reported by monores.
T20s_proteosome_tutorial
(47, 136, v1.2):
Tutorial workflow used for some Scipion courses.
Atom_Struct_Modeling_Demo
(30, 95, v2.0 (2019-03-06) Diocletian (release-2.0.0 99cd4821da)):
Test project used in model building tutorial: https://github.com/I2PC/scipion/wiki/tutorials/tutorial_model_building_basic.pdf
BASIC_Import_Mcorr2_Ctffind4_Gain_Summary
(22, 93, 1.2):
Basic workflow for data acquisition with import movies, motioncor2, ctffind, gain and summary
BASIC_Import_Mcorr2_Ctffind4_Summar
(19, 74, 1.2):
Basic workflow for facilities: motioncor, ctffind, summary
import_fitChimera_coot_refmac
(12, 69, 1.3):
Basic model building; (1) import data, (2) rigid fit with chimera, (3) manual refinement coot and (4) automatic refinement refmac
TOMO_ScipionBox
(10, 53, (2018-05-18) (release-1.2.1 92b345f)):
Tilted series acquisition as movies
Phase_Plate_mottioncor_ctffing_gctf_gain
(9, 63, 1.2):
Basic workflow for phase plate collection with motioncor2 ctffind gain and sumamry
All2Monitor_GPU_Import_Gain_Mcor2_MaxShift_gCTF_XmippCTF_CTFcons_Summary
(8, 38, v2.0 (2019-04-23) Diocletian):
Workflow to monitor gain stability, movie alignment and ctf estimation using the summary monitor. GPU
TestRelionClassify 2D
(7, 69, 1.3):
2D classification using Relion