Workflows
workflow_name (# downloads, # views, scipion version)
Relion_3_tutorial-betagal
(249, 1249, v1.2.1 (2018-09-11) Claudio):
Relion 3 tutorial in Scipion. Reaching 2.9 reported by monores.
Atom_Struct_Modeling_Demo
(164, 683, v2.0 (2019-03-06) Diocletian (release-2.0.0 99cd4821da)):
Test project used in model building tutorial: https://github.com/I2PC/scipion/wiki/tutorials/tutorial_model_building_basic.pdf
T20s_proteosome_tutorial
(118, 591, v1.2):
Tutorial workflow used for some Scipion courses.
BASIC_Import_Mcorr2_Ctffind4_Gain_Summary
(104, 497, 1.2):
Basic workflow for data acquisition with import movies, motioncor2, ctffind, gain and summary
TestRelionClassify3D
(91, 483, 1.3):
3D calssification using relion, example with and without GPU
import_fitChimera_coot_refmac
(84, 491, 1.3):
Basic model building; (1) import data, (2) rigid fit with chimera, (3) manual refinement coot and (4) automatic refinement refmac
BASIC_Import_Mcorr2_Ctffind4_Summar
(80, 509, 1.2):
Basic workflow for facilities: motioncor, ctffind, summary
Phase_Plate_mottioncor_ctffing_gctf_gain
(80, 467, 1.2):
Basic workflow for phase plate collection with motioncor2 ctffind gain and sumamry
TOMO_ScipionBox
(80, 452, (2018-05-18) (release-1.2.1 92b345f)):
Tilted series acquisition as movies
All2Monitor_CPU_Gain_XmippAlign_MaxShift_CTFfind4_XmippCtf_CTFcons
(75, 440, v2.0 (2019-04-23) Diocletian):
A basic workflow from movies to CTF consensus using only CPU